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Aging cell
Published

Assessing Metabolic Ageing via DNA Methylation Surrogate Markers: A Multicohort Study in Britain, Ireland and the USA

Authors

Kexin Xu, Belinda Hernández, Thalida Em Arpawong, Stephane Camuzeaux, Elena Chekmeneva, Eileen M Crimmins, Paul Elliott, Giovani Fiorito, Beatriz Jiménez, Rose Anne Kenny, Cathal McCrory, Sinead McLoughlin, Rui Pinto, Caroline Sands, Paolo Vineis, Chung-Ho E Lau, Oliver Robinson

Abstract

Aging Cell. 2025 Jan 20:e14484. doi: 10.1111/acel.14484. Online ahead of print.

ABSTRACT

Metabolomics and epigenomics have been used to develop 'ageing clocks' that assess biological age and identify 'accelerated ageing'. While metabolites are subject to short-term variation, DNA methylation (DNAm) may capture longer-term metabolic changes. We aimed to develop a hybrid DNAm-metabolic clock using DNAm as metabolite surrogates ('DNAm-metabolites') for age prediction. Within the UK Airwave cohort (n = 820), we developed DNAm metabolites by regressing 594 metabolites on DNAm and selected 177 DNAm metabolites and 193 metabolites to construct 'DNAm-metabolic' and 'metabolic' clocks. We evaluated clocks in their age prediction and association with noncommunicable disease risk factors. We additionally validated the DNAm-metabolic clock for the prediction of age and health outcomes in The Irish Longitudinal Study of Ageing (TILDA, n = 488) and the Health and Retirement Study (HRS, n = 4018). Around 70% of DNAm metabolites showed significant metabolite correlations (Pearson's r: > 0.30, p < 10-4) in the Airwave test set and overall stronger age associations than metabolites. The DNAm-metabolic clock was enriched for metabolic traits and was associated (p < 0.05) with male sex, heavy drinking, anxiety, depression and trauma. In TILDA and HRS, the DNAm-metabolic clock predicted age (r = 0.73 and 0.69), disability and gait speed (p < 0.05). In HRS, it additionally predicted time to death, diabetes, cardiovascular disease, frailty and grip strength. DNAm metabolite surrogates may facilitate metabolic studies using only DNAm data. Clocks built from DNAm metabolites provided a novel approach to assess metabolic ageing, potentially enabling early detection of metabolic-related diseases for personalised medicine.

PMID:39829316 | DOI:10.1111/acel.14484

UK DRI Authors

Paul Elliott

Prof Paul Elliott

Group Leader

Using advanced methods in genetic, epidemiology and metabolic phenotyping to improve understanding of dementias

Prof Paul Elliott