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Bioinformatics
Published

ggtranscript: an R package for the visualization and interpretation of transcript isoforms using ggplot2.

Authors

Emil K Gustavsson, David Zhang, Regina H Reynolds, Sonia Garcia-Ruiz, Mina Ryten

Abstract

The advent of long-read sequencing technologies has increased demand for the visualization and interpretation of transcripts. However, tools that perform such visualizations remain inflexible and lack the ability to easily identify differences between transcript structures. Here, we introduce ggtranscript, an R package that provides a fast and flexible method to visualize and compare transcripts. As a ggplot2 extension, ggtranscript inherits the functionality and familiarity of ggplot2 making it easy to use.

PMID:35751589 | DOI:

UK DRI Authors

Mina Ryten

Prof Mina Ryten

Centre Director

Leveraging brain transcriptomics to understand the pathophysiology of Lewy body diseases

Prof Mina Ryten